Import 'FreeSurfer' or 'SUMA' files into the viewer structure
Source:R/fs_import.R
import-fs-suma.Rd
Import 'T1-MRI', surface files, curvature/'sulcus', atlas, and
'Talairach' transform matrix into 'json' format. These functions are not
intended to be called directly, use import_from_freesurfer
instead.
Usage
import_fs(
subject_name,
fs_path,
quiet = FALSE,
dtype = c("T1", "surface", "curv", "atlas_volume", "atlas_surface", "xform"),
sub_type = NULL,
hemisphere = c("l", "r"),
...
)
import_suma(
subject_name,
fs_path,
quiet = FALSE,
dtype = c("T1", "surface", "curv", "atlas_volume", "atlas_surface", "xform"),
sub_type = NULL,
hemisphere = c("l", "r"),
...
)
Arguments
- subject_name
character, subject code
- fs_path
path to 'FreeSurfer' folder
- quiet, ...
passed from or to other methods.
- dtype
data type to import, choices are
'T1'
,'surface'
,'curv'
,'atlas_volume'
,'atlas_surface'
,'xform'
- sub_type
detailed files to import.
'atlas_surface'
is not supported for now- hemisphere
which hemisphere to import, ignored when
dtype
is in'T1'
,'atlas_volume'
,'atlas_surface'
,'xform'
.