Function reference • rpyANTs

All functions

ants load_ants(): Get 'ANTsPy' module

ants_apply_transforms(): Apply a transform list to map an image from one domain to another

ants_apply_transforms_to_points(): Apply a transform list to map points from one domain to another

ants_available(): Check if 'ANTs' is available

ants_motion_correction(): Motion correction

ants_plot(): Plot single 'ANTsImage'

ants_plot_grid(): Plot multiple 'ANTsImage'

ants_registration(): Register two images using 'ANTs'

ants_resample_image(): Resample image

load_antspynet(): Get 'ANTsPyNet' module

antspynet_brain_extraction(): Extract brain and strip skull

antspynet_preprocess_brain_image(): Process brain image prior to segmentation

antspynet_desikan_killiany_tourville_labeling() antspynet_deep_atropos(): Imaging segmentation using antspynet

as_ANTsImage(): Load data as 'ANTsImage' class

as_ANTsTransform(): Convert to 'ANTsTransform'

correct_intensity(): Truncate and correct 'MRI' intensity

ensure_template(): Ensure the template directory is downloaded

halpern_register_ct_mri() halpern_register_template_mri() halpern_apply_transform_template_mri(): 'ANTs' functions for 'Halpern' lab

install_ants(): Install 'ANTs' via 'ANTsPy'

is_affine3D(): Check if an object is a 3D 'affine' transform matrix

py: Get 'Python' main process environment

py_builtin(): Get 'Python' built-in object

py_list(): List in 'Python'

py_slice(): Slice index in 'Python' arrays

t1_preprocess(): Process 'T1' image